PT Instructions
Week 08, 2024 (19 & 20 Feb 2024)
PURPOSE
To provide for detailed instructions for participants in compliance with the requirements of ISO 17043, clause 4.6.1
INSTRUCTIONS
Scheme
reference |
Samples | Samples reconstitution and Techniques | Testing timeframe | Approved test methods | Sheet to be used for submission of results to JGK | Unit of measurement (Results) | Number of test replicates per sample | ||
Type | Identification
(as per the labels) |
Storage | |||||||
JGKPT01
Antimicrobial susceptibility (Clin. Pathogens) |
2 x FD cultures
2 x Amies swabs: backup samples 1 x NA Plate with 2 grown bacteria: QC plate. Incubation can be extended if necessary Notes: 1. Culturing must be done from the FD cultures (see reconstitution) 2. The swabs can be used as BKP samples if there is a problem. 3. The NA plate serves only as QC for the growth of the 2 FD culture |
ATB01/C – Sheep isolate
ATB02/C – Dog isolate |
2-8oC | Allow cultures and sDH2O to adjust to room temperature.
Remove seals and bungs from the vials and add 400 µl sDH2O to each vial. Allow the pellet to dissolve completely. Immediately, saturate a sterile swab with the reconstituted sample and inoculate 1/3 of the agar/culture plates (plates as per lab’s SOP). Using a sterile loop streak to facilitate discrete colonies.
Proceed with Antibiogram as per Lab’s SOP |
These samples are short-term samples; not intended for long term storage.
Preferably, test the samples immediately upon receipt and upon reconstitution |
Disc diffusion technique
(Kirby Bauer) |
R.E.F 1.0
(available on www.jgklab.co.za) |
Zone Ø in millimeters.
Report results as: Sensitive (S), Intermediate (I), Resistance (R) |
Culture ID: 1
Susceptibility: Supplied discs: 3 (as per result sheet) |
Antimicrobial discs
(x 18) |
Vancomycin 30 µg (x 6)/ Oxoid; Lot # 3229636.
Cefpodoxime 10 µg (x 6)/ Oxoid; Lot # 3199565. Sulphamethoxazole/Trimethoprim 25 µg (x6)/ Oxoid; Lot # 3552294. |
Discs are ready to use (Commercial discs) | |||||||
JGKPT03
Brucella: RBT (Samples for labs doing RBT only) |
6 x FD cattle sera | RBT01 – RBT06 | 2-8oC | Reconstitution:
Allow sera and sDH2O to adjust to room temperature. Remove seals and bungs, and add sDH2O as follows: Sample/vial 1: 300 µl Sample/vial 2: 1 ml Sample/vial 3: 200 µl Sample/vial 4: 500 µl Sample/vial 5: 500 µl Sample/vial 6: 200 µl Do not add cold water. |
Reconstituted samples must be mixed on the vortex and tested immediately.
There must be no clumps in the serum when tested |
RBT only | R.E.F 3-5
(available on www.jgklab.co.za) |
Positive (low, medium, high)
Or
Negative |
1 |
JGKPT04
Brucella: RBT/CFT (Samples for labs doing both RBT and CFT) |
6 x FD cattle sera | RBT/CFT01 – RBT/CFT06 | 2-8oC | Reconstitution:
Allow sera and sDH2O to adjust to room temperature. Remove seals and bungs, and add sDH2O as follows: Sample/vial 1: 500 µl Sample/vial 2: 500 µl Sample/vial 3: 500 µl Sample/vial 4: 500 µl Sample/vial 5: 500 µl Sample/vial 6: 1 ml Do not add cold water. |
Reconstituted samples must be mixed on the vortex and tested immediately.
There must be no clumps in the serum when tested |
RBT and CFT | R.E.F 3-5
(available on www.jgklab.co.za) |
RBT:
Positive (low, medium, high) Or Negative |
1 |
CFT:
Option 1: Endpoint reaction (e.g. 1/4 ++++, 1/128+)
Option 2: Titer (e.g. 24, 480)
NB: the corresponding serum dilution (e.g. 1/4) must always be indicated or ticked on the result sheet |
2
|
||||||||
JGKPT05
Brucella: MRT |
4 x bulk tank milk
(not preserved) |
CAM01 – CAM04 | 2-8oC | N/A
Ready to process |
Test immediately upon receipt | MRT | R.E.F 3-5
(available on www.jgklab.co.za) |
Positive
Or Negative |
1 |
JGKPT06
Brucella: Culture & Identification |
4 x FD cultures
|
CAC01 – CAC04 | 2-8oC | Reconstitution:
Allow cultures and sDH2O to adjust to room temperature. Remove seals and bungs, and add sDH2O as follows: Sample/vial 1: 300 µl Sample/vial 2: 400 µl Sample/vial 3: 400 µl Sample/vial 4: 400 µl Allow the pellet to dissolve completely. Immediately, saturate a sterile swab with the reconstituted sample and inoculate 1/3 of the agar/culture plates (plates as per lab’s SOP). Using a sterile loop streak to facilitate discrete colonies |
These samples are short-term samples; not intended for long term storage.
Preferably, test the samples immediately upon receipt and upon reconstitution |
Conventional microbiology
and
Molecular technique |
R.E.F 06
(available on www.jgklab.co.za) |
Presence or Absence of Brucella abortus
Strain: Field or vaccine |
1 |
JGKPT07
Brucella Slides |
9 x unstained smears | BA Slide 01: x 3
BA Slide 02: x 3 BA Slide 03: x 3 |
Room To
Dust-free |
Proceed with staining technique as per the laboratory’s SOP | Test immediately upon receipt | Stamp’s staining technique | R.E.F 06
(available on www.jgklab.co.za) |
Positive or Negative for Brucella | 1 |
JGKPT08
Bacteriology: Listeria species (Clinical Micro) |
3 x FD cultures
3 x Amies swabs: Backup samples Notes: 1. Culturing must be done from the FD cultures (see reconstitution) 2. The swabs are backup samples to be used only if there is a problem with primary cultures |
LM01 – LM03 | 2-8oC | Reconstitution:
Allow cultures and sDH2O to adjust to room temperature. Remove seals and bungs, and add sDH2O as follows: Sample/vial 1: 400 µl Sample/vial 2: 400 µl Sample/vial 3: 400 µl Allow the pellet to dissolve completely. Immediately, saturate a sterile swab with the reconstituted sample and inoculate 1/3 of the agar/culture plates (plates as per lab’s SOP). Using a sterile loop streak to facilitate discrete colonies |
These samples are short-term samples; not intended for long term storage.
Preferably, test the samples immediately upon receipt and upon reconstitution |
Conventional microbiology
and
Molecular technique |
R.E.F 08-10
(available on www.jgklab.co.za) |
Full bacterial identification for each isolate (i.e. identify to Genus and Species Level)
Listeria: Identify to Genus Level, Listeria, and to Species Level, e.g. monocytogenes) |
1 |
JGKPT09
Bacteriology: Salmonella in Poultry (Clinical Micro) |
3 x FD cultures
3 x Amies swabs: Backup samples Notes: 1. Culturing must be done from the FD cultures (see reconstitution) 2. The swabs are backup samples to be used only if there is a problem with primary cultures |
SAP01 – SAP03 | 2-8oC | Reconstitution:
Allow cultures and sDH2O to adjust to room temperature. Remove seals and bungs, and add sDH2O as follows: Sample/vial 1: 400 µl Sample/vial 2: 300 µl Sample/vial 3: 400 µl Allow the pellet to dissolve completely. Immediately, saturate a sterile swab with the reconstituted sample and inoculate 1/3 of the agar/culture plates (plates as per lab’s SOP). Using a sterile loop streak to facilitate discrete colonies |
These samples are short-term samples; not intended for long term storage.
Preferably, test the samples immediately upon receipt and upon reconstitution |
Conventional microbiology
and
Molecular technique |
R.E.F 08-10
(available on www.jgklab.co.za) |
Full bacterial identification for each isolate (i.e. identify to Genus and Species Level)
Salmonella: Identify to Genus Level, Salmonella, and to Serotype Level, e.g. Enteritidis) |
1 |
JGKPT10
Bacteriology: Salmonella in Mammals (Clinical Micro) |
3 x FD cultures
3 x Amies swabs: Backup samples Notes: 1. Culturing must be done from the FD cultures (see reconstitution) 2. The swabs are backup samples to be used only if there is a problem with primary cultures |
SAM01 – SAM03 | 2-8oC | Reconstitution:
Allow cultures and sDH2O to adjust to room temperature. Remove seals and bungs, and add sDH2O as follows: Sample/vial 1: 400 µl Sample/vial 2: 300 µl Sample/vial 3: 400 µl Allow the pellet to dissolve completely. Immediately, saturate a sterile swab with the reconstituted sample and inoculate 1/3 of the agar/culture plates (plates as per lab’s SOP). Using a sterile loop streak to facilitate discrete colonies |
These samples are short-term samples; not intended for long term storage.
Preferably, test the samples immediately upon receipt and upon reconstitution |
Conventional microbiology
and
Molecular technique |
R.E.F 08-10
(available on www.jgklab.co.za) |
Full bacterial identification for each isolate (i.e. identify to Genus and Species Level)
Salmonella: Identify to Genus Level, Salmonella, and to Serotype Level, e.g. Typhimurium) |
|
JGKPT35 & 37
Trichomonas and Campylobacter ID by Culture |
5 x Cultures in transport media | SW01 – SW05 | 2-8oC | N/A
Ready to process |
Test immediately upon receipt | Conventional microbiology | R.E.F 35-38
(available on www.jgklab.co.za) |
Presence or Absence of
Trichomonas foetus/ Campylobacter fetus |
1 |
JGKPT36 & 38
Trichomonas and Campylobacter ID by PCR |
Molecular technique | 1 | |||||||
Treatment of samples
No special treatment should be given to the PT samples. They [PT samples] should be handled in the same manner as all the other samples routinely tested in the laboratory, including TAT
Handling and safety requirements Contact surfaces must be decontaminated with 70% alcohol or other suitable disinfectants. Used laboratory utensils must be cleaned and sterilized as per laboratory standard operating procedure. Unused materials and waste must be removed as per laboratory waste management protocol. This involves autoclaving and/or removal by an approved waste removal company.
Specific environmental conditions required for the participant to conduct tests JGKPT06 (Brucella Culture) must be handled in a biological safety cabinet class 2+
Results recording Only the supplied excel “Result entry forms” [R.E.F] should be used to capture the PT results. The R.E.F grouped into WK8,19,31,43 and WK9,20,32,44 are available online (www.jgklab.co.za) and can be downloaded under “PUBLICATIONS” The Participants must fill in the cover page and answer all questions before capturing the results on R.E.F.
Submission of PT results to JGK All results must be submitted on Wednesday, 13th of March 2024. Any results received after this date will not be included in the analysis.
Enquiries For any inquiry, please use the contact details provided above to contact JGK
Return of the proficiency test items None |
FD: Freeze-Dried